FastQCFastQC Report
Sat 11 May 2024
EGAF00006168067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006168067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26055273
Total Bases2.5 Gbp
Sequences flagged as poor quality0
Sequence length30-100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTT554890.21296648858755No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT315210.12097743132455377No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)