FastQCFastQC Report
Sun 21 May 2023
EGAF00006171456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006171456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences351
Sequences flagged as poor quality0
Sequence length200
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA9827.92022792022792No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA4211.965811965811966No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA267.4074074074074066No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA246.837606837606838No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA82.2792022792022792No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA71.9943019943019942No Hit
TACGTATGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA71.9943019943019942No Hit
TACCGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA71.9943019943019942No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTGTCTACACACATAT61.7094017094017095No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGCGCGTA51.4245014245014245No Hit
TACAGAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA41.1396011396011396No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTGTCTACACACATAT41.1396011396011396No Hit
CATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTCTACACACATAT41.1396011396011396No Hit
TACGCAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA41.1396011396011396No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGACTGTCTACACACATAT30.8547008547008548No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTGTCTACACACATAT30.8547008547008548No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTGTCTACACACATAT30.8547008547008548No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTCTACACACATATCTC30.8547008547008548No Hit
TACGTAGGGTGCGAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA20.5698005698005698No Hit
CATTAGATACCCTAGTAGTCCGGCTGACTGACTGTCTACACACATATCTC20.5698005698005698No Hit
CATTATTAGATACCCTGGTAGTCCGGCTGACTGACTGTCTACACACATAT20.5698005698005698No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTCTACACACATAT20.5698005698005698No Hit
CATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTCTACACACATATCTC20.5698005698005698No Hit
CATTAGAAACCCCGGTAGTCCGGCTGACTGACTGTCTACACACATATCTC20.5698005698005698No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA20.5698005698005698No Hit
TACAGAGGGTGCAAGCGTTAAGCGGAATTACTGGGCGTAAAGCGCGCGTA20.5698005698005698No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCTCGTA20.5698005698005698No Hit
CATTATTAGATACCCTAGTAGTCCGGCTGACTGACTGTCTACACACATAT20.5698005698005698No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA20.5698005698005698No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATAACTGGGCGTAAAGCGCGCGTA20.5698005698005698No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2849002849002849No Hit
CATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTCTACACACATATATC10.2849002849002849No Hit
CATCTTAGAAACCCCGGTAGTCCGGCTGACTGCCTGTCTACACACATATC10.2849002849002849No Hit
CATTATTAGATACCACGGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
CATTACTAGAAACCCCAGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
TCCAGTCCGTTCAGTTGTTGCAGTGGATTAGTCAGGTTAAATTTAATGTG10.2849002849002849No Hit
TACGGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGCGCGTA10.2849002849002849No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGTGCGCA10.2849002849002849No Hit
CATATTAGATACCCGGGTAGTCCGGCTGACTGACTGTCTACACACATATC10.2849002849002849No Hit
ACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGAGCGCGTAG10.2849002849002849No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATCATTGGGCGTAAAGCGCGTGTA10.2849002849002849No Hit
TACGAGGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA10.2849002849002849No Hit
CATTCTTCGAAACCCCTGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTAGGTTTAAAGGGTGCGTA10.2849002849002849No Hit
TACCGAGGGCGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA10.2849002849002849No Hit
CATTAGAAACACCGGTAGTCCGGCTGACTGACTGTCTACACACATAACTC10.2849002849002849No Hit
CATATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTCTACACACATATC10.2849002849002849No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.2849002849002849No Hit
TACAGAGGGTGCAAGCGTTGATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2849002849002849No Hit
AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCG10.2849002849002849No Hit
CATTAGATACCCCAGTAGTCCGGCTGACTGACTGTCTACACACATCTCGT10.2849002849002849No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATCGCTGGGCGTAAAGCGCACGTA10.2849002849002849No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTC10.2849002849002849No Hit
CATTAGAAACCCGGTAGTCCGGCTGACTGACTGTCTACACACATATCTCG10.2849002849002849No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGATTGTCTACAAACATAT10.2849002849002849No Hit
CATTAATAGATACCCGAGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
CATTAGAAACCCGGGTAGTCCGGCTGACTGACTGTCTACACACATATCTC10.2849002849002849No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
TACCGAGGGTGCGAGCGTTACTCGGATTTACTGGGCGTAAAGTGTGCGTA10.2849002849002849No Hit
CATTATTAGATACCCTAGTAGTCCGGCTGACTGACTGTCTACCCACATAT10.2849002849002849No Hit
CAATTAGATACCCCGGTAGTCCGGCGGACTGACTGTCTACACACATATCG10.2849002849002849No Hit
TACGGAGGGTGCGAGCGTTATTCGGATTTACTGGGCGTAAAGCGTGCGTA10.2849002849002849No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTGTCAACACACATAA10.2849002849002849No Hit
TACCGAGGGTGCAAGCGTTAATCGGAATTACTGGACGTAAAGCGCGCGTA10.2849002849002849No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTGTCTACACCCATATCTC10.2849002849002849No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTGTCTACAAACATAT10.2849002849002849No Hit
CCGCCGTATCATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTCTACAC10.2849002849002849No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACAGGGCGTAAAGCGCGCGTA10.2849002849002849No Hit
GCCTGAGTATGGTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACT10.2849002849002849No Hit
CATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTCTACACACATATCTC10.2849002849002849No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTGTCTACAAACATAT10.2849002849002849No Hit
TACAGAGAGCGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA10.2849002849002849No Hit
CATTATTAGATACCCTAGTAGTCCGGCTGACTGACTGTCTACACACATAC10.2849002849002849No Hit
CATTAGATACCCTGGTAGTCCGGCTGACTGACTGTCTACACCCATATCTC10.2849002849002849No Hit
CATTATTAGATACCAGAGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTGCTGGGCGTAAAGCGCGCGTA10.2849002849002849No Hit
CATTAGAAACCCGAGTAGTCCGGCTGACTGACTGTCTACACACATATCTC10.2849002849002849No Hit
ACAATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTCTACACACATATC10.2849002849002849No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTGTCTACACACATATCTC10.2849002849002849No Hit
TACAGAGGGTGCAAGCGCTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2849002849002849No Hit
CATTAGAAACCCTGGTAGTCCGGATGACTGACTGTCTACACACATATCTC10.2849002849002849No Hit
CATTATTAGATACCTCAGTAGTCCGGCTGACTGACTGTCTACAGACATAT10.2849002849002849No Hit
CATTAGATACCCGAGTAGTCCGGCTGACTGACTGTCTACACACCTATCTC10.2849002849002849No Hit
CATTACTAGATACCCTGGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAACGCGCGTA10.2849002849002849No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA10.2849002849002849No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTGTCTACAAACATAT10.2849002849002849No Hit
ACAGAGGGTGCAAGTGTTAATCGGAATTACTGGGCGTACAGTGAGCGTAG10.2849002849002849No Hit
ACAATTAGAAACCCCGGTAGTCCGGCTGACTGACTGTCTACACACATATC10.2849002849002849No Hit
CATTAGAAACCCGGGTAGTCCGGCTGACTGACTGTCTACACCCATAACTC10.2849002849002849No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTCTACACACATTT10.2849002849002849No Hit
TACAGAGGGTGCAAGCGTTAATCGGAACTACTGGGCGTAAAGCGCGCGTA10.2849002849002849No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTGTCTACACACATATCTC10.2849002849002849No Hit
CATATTAGAAACCCGTGTAGTCCGGCTGAATGACTGTCTACACACATATC10.2849002849002849No Hit
CATTATTAGAAACCCGTGTAGTCCGGCTGACTGACTGTCTACACACATAT10.2849002849002849No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGTGCGTA10.2849002849002849No Hit
CATTATTAGAAACCCGGTAGTCCGGCTGACTGACTGTCTACACACATAAC10.2849002849002849No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)