FastQCFastQC Report
Sun 21 May 2023
EGAF00006171460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006171460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429
Sequences flagged as poor quality0
Sequence length200
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA9622.377622377622377No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA5212.121212121212121No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA429.79020979020979No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA409.324009324009324No Hit
TACCGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA102.331002331002331No Hit
TACGTAGGGTGCGAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA71.6317016317016315No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA61.3986013986013985No Hit
GACGAACCGTGCGAACGTTGTTCGGAATCACTGGGCTTAAAGGGCGCGTA61.3986013986013985No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA61.3986013986013985No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCCAT40.9324009324009324No Hit
CATTATTAGATACCCCGGTAGTCCGGCTGACTGACTGTATTACGATCCAT40.9324009324009324No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA40.9324009324009324No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTGTATTACGATCCAT40.9324009324009324No Hit
TACGCAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA40.9324009324009324No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA30.6993006993006993No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTGTATTACGATCCAT30.6993006993006993No Hit
ACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAG30.6993006993006993No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGAGCGTA30.6993006993006993No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTGTATTACGATCCAT30.6993006993006993No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.4662004662004662No Hit
TACAGAGGGTGCAAGCGTTAACCGGAATTACTGGGCGTAAAGCGCGCGTA20.4662004662004662No Hit
TACAGAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA20.4662004662004662No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCAT20.4662004662004662No Hit
CATTAGATACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCATCTC20.4662004662004662No Hit
CTGACACAATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTATTACGAT20.4662004662004662No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGACTGTATTACGATCCAT20.4662004662004662No Hit
CATTATTAGAAACCCGTGTAGTCCGGCTGACTGACTGTATTACGATCCAT20.4662004662004662No Hit
GACAGAGGGTGCGAACGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTA20.4662004662004662No Hit
TACGTGGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA20.4662004662004662No Hit
TACGCAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA20.4662004662004662No Hit
CATTATTAGATACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCCAT20.4662004662004662No Hit
TACGAAGGGGGCTAGCGTCGCTCGGAATTACTGGGCGTAAAGGGCGCGTA10.2331002331002331No Hit
CATTAGATACCCGTGTAGTCAGGCTGACTGACTGTATTACGATCCATCTC10.2331002331002331No Hit
GACAGAGGGTGCGAACGTTGTCCGGAATTACTGGGCGTAAAGCGCGCGTA10.2331002331002331No Hit
TACGGAGGATCCGAGCGTTATCCGAATTTATTGGGTTTAAAGGGAGCGTA10.2331002331002331No Hit
TACAGAGGGTGCAAGCGTTAACCGGAATTACTGGGCGTAAAGCGAGCGCA10.2331002331002331No Hit
TAAAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2331002331002331No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA10.2331002331002331No Hit
CATTAGAACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCCATCTCG10.2331002331002331No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGAGCGTAAAGCGTGCGCA10.2331002331002331No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA10.2331002331002331No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCAACTC10.2331002331002331No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCATCTC10.2331002331002331No Hit
CCCAGGAGCCACAAGTGGCAACCACCTTTATTGGGCCTAAAGCGTCCGCA10.2331002331002331No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTAGGTTTAAAGGGTGCGTA10.2331002331002331No Hit
TACCGATGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGTGTA10.2331002331002331No Hit
CATTAGATACCCGGGTAGTCCGGCTGACTGACTGTATTACGATCCATCTC10.2331002331002331No Hit
CATTCTTAGATACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTATTAGATACCCGGGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGCCTGTATTACGATCCAT10.2331002331002331No Hit
CTGACACAATTAGAAACCCGTGTAGTCCGGCTGACTGACTGTATTACGAT10.2331002331002331No Hit
CATTATTAGAAACACCCGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTATTAGATACCCGAGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTATTAGATACCCGCGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTTACTGGGTTTAAAGGGTGCGTA10.2331002331002331No Hit
CCCAGGAGCCACAAGTGGCAACCACCTTTATTGGGCCTAAAGCGTCCGTA10.2331002331002331No Hit
CTGACACAATTAGAAACCCTTGTAGACCGGCTGACTGACTGTATTACGAT10.2331002331002331No Hit
TACAGAGGTCTCAAGCGTTGTTCGGAATCACTGGGCGTAAAGCGTGCGTA10.2331002331002331No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CTGACACAATTAGAAACCAGGGTAGTCCGGCTGACTGACTGTATTACGAT10.2331002331002331No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCAAT10.2331002331002331No Hit
CATTAGAAACCCTAGTAGTCCGGCTGACTGACTGTATTACGATCCATCTA10.2331002331002331No Hit
CATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCCATCTC10.2331002331002331No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTGTATTACGATCCAA10.2331002331002331No Hit
TTAGCAACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCCATCTCGT10.2331002331002331No Hit
CTGACACAATTAGAAACCCTAGTAGTCAGGCTGACTGACTGTCTTACGAT10.2331002331002331No Hit
GACAGAGGGTGCGACCGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTA10.2331002331002331No Hit
CATTAGATACCCGTGTAGTCCGGCTGACTGACTGTATTACGATCCCTCTC10.2331002331002331No Hit
ACAATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCATC10.2331002331002331No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.2331002331002331No Hit
CATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTATTCGAAACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTATAGAAACCCGTGTAGTCCGGCTGACTGAATGTATTACGATCCATC10.2331002331002331No Hit
CCCAGGAGCCACAAGGGGCAACCACCTTTATTGGGCCTAAAGCGTCCGTA10.2331002331002331No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTAGGCGTAAAGCGCGCGTA10.2331002331002331No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGAATGTATTACGATCCAT10.2331002331002331No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCATAAAGCGTGCGCA10.2331002331002331No Hit
CTGACACAATTAGAAACCCTTGTAGTCCGGCTGACTGACTGTATTACGAT10.2331002331002331No Hit
ACCGAAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTAC10.2331002331002331No Hit
CAATAGATACCCTTGTAGTCAGGCTGACTGACTGTATTACGATACATATC10.2331002331002331No Hit
CATTAGATACCCTAGTAGTCCGGCTGACTGACTGTATTACGATCCATCTC10.2331002331002331No Hit
CTGACACAATTAGATACCCCTGTCGTCCGGCTGACTGACTGTATTACGAT10.2331002331002331No Hit
GACAGAGGGTGCGAACGTTGTCCGGAATTACTGGGCGTAAAGCGCGTGTA10.2331002331002331No Hit
CATTCGAAACCCTAGTAGTCCGGCTGACTGACTGTATTACGATCCATCTC10.2331002331002331No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTCAAGCGTGCGCA10.2331002331002331No Hit
CATTAGAACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCCATCTCG10.2331002331002331No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAACGCGCGCGTA10.2331002331002331No Hit
CTGAAACAATTAGAAACCCGAGTAGTCCGGCTGACTGACTGTATTACGAT10.2331002331002331No Hit
TACGGAGGATCCGAGCGTTATCCGGATTCATTGGGTTTAAAGGGTGCGTA10.2331002331002331No Hit
TCATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCA10.2331002331002331No Hit
TCATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCCA10.2331002331002331No Hit
CTGCCACAATTAGATACCCTGGTCGTCCGGCTGCCTGCCTGTATTCCGAT10.2331002331002331No Hit
TACGTAGGGTGCGAGTGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.2331002331002331No Hit
CAGTAGATACCCTTGGAGTCCGGCTGACTGAATGGATTACGATTCATATC10.2331002331002331No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTGTATTACGATCCATATC10.2331002331002331No Hit
TACGGAGGTGGCAAGCGTTACTCGGAGTCATTGGGTGTAAAGGGCAAGTA10.2331002331002331No Hit
CATATTAGAAACCCCGGTAGTCCGGCTGACTGACTGTATTACGATCCATC10.2331002331002331No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTATTACAATCCAT10.2331002331002331No Hit
CATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCCATCTC10.2331002331002331No Hit
GACGCACCGTGCGAACGTTGTTCGGAATCACTGGGCTTAAAGGGCGCGTA10.2331002331002331No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2331002331002331No Hit
CATTATTAGATACCCTTGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
TACGGAGGTGGCAAGCGTTACTCGGAATCATTGGGTGTAAAGGGCCAGTA10.2331002331002331No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCAAT10.2331002331002331No Hit
CATTAATAGATACCCCGGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
TACGCAGGTGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA10.2331002331002331No Hit
CATTAGAAACCCCGGTAGTCCGGCTGACTGACTGTATTACGATCCATATC10.2331002331002331No Hit
TACGAACCGTGCGAACGTTGTTCGGAATCACTGGGCTTAAAGGGCGCGTA10.2331002331002331No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCCAC10.2331002331002331No Hit
TAACTTGACTCATGATTTCTTACCTATTAGTGGTTGAACAGCCTCGGACT10.2331002331002331No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTATTAGGATCCAT10.2331002331002331No Hit
CTGACACAATTAGATACCCGTGTAGTCCGGCTGACTGACTGTATTACGAT10.2331002331002331No Hit
CATATTAGAAACCCGAGTAGTCCGGCTGACTGACTGTCTTACGATCCATC10.2331002331002331No Hit
TACAGAGGGTGCAAGCGTTAAGCGGAATTACTGGGCGTAAAGCGCGCGTA10.2331002331002331No Hit
CTGACACAATTAGAAACCCGAGTAGTCCGGCTGACTGACTGTATTAAGAT10.2331002331002331No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTGTATTACGATCCAA10.2331002331002331No Hit
CATTAGTAGATACCCCGGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
GTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCT10.2331002331002331No Hit
CATTATTCGAAACCCGTGTAGTCCGGCTGACTGACTGTATTACGATACAT10.2331002331002331No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCTCGTA10.2331002331002331No Hit
TCCGGCTGACTGACTGTATTAGAAACCCTTGTAGTCAGGCTGACTGACTG10.2331002331002331No Hit
TACCGAGGGTGTAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA10.2331002331002331No Hit
TACAGAGGGTGCAAGCGTTAATCGGAACTACTGGGCGTAAAGCGCGCGTA10.2331002331002331No Hit
TACAGAGGGTGCAAGCGTTAATCGGAGTTACTGGGCGTAAAGCGCGCGTA10.2331002331002331No Hit
GACGCACCGTGCGACCGTTGTTCGGAATCACTGGGCTTAAAGGGCGCGTA10.2331002331002331No Hit
CATTATTAGATACCCCGGTAGTCCGGCTGACTGACTGTATTACGATACAT10.2331002331002331No Hit
CATTCGACACCCCGGTCGTCCGGCTGACTGACTGTATTACGATCCCTCTC10.2331002331002331No Hit
CAGTAGAAACCCGGGGAGTCCGGCTGAATGAATGTATTACGATACAAATC10.2331002331002331No Hit
CATTAGATACCCTTGTAGTCCGGCTGACTGACTGTATTACGATCCATATC10.2331002331002331No Hit
CGGCAGCGGTCCCCAAACGCATCCTAGATTAGAAACCCGAGTAGTCCGGC10.2331002331002331No Hit
TTAGAACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCCATCTCGTA10.2331002331002331No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTCAAGGGCGCGTA10.2331002331002331No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTGTATTACGATCCAT10.2331002331002331No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTGTATTACGATCCAACTC10.2331002331002331No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2331002331002331No Hit

[OK]Adapter Content

Adapter graph