FastQCFastQC Report
Sun 21 May 2023
EGAF00006171466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006171466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1371
Sequences flagged as poor quality0
Sequence length200
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA1349.773887673231219No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA1077.804522246535376No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA755.470459518599562No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA654.741064916119621No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA614.449307075127644No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA554.011670313639679No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA322.3340627279358133No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA322.3340627279358133No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA312.261123267687819No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA292.1152443471918305No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA261.8964259664478482No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA201.4587892049598834No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA191.3858497447118892No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA171.2399708242159009No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA171.2399708242159009No Hit
TACGGAGGATGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA171.2399708242159009No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTCGCAAATTCGACAT151.0940919037199124No Hit
TACGGGGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGCGCGTA151.0940919037199124No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA151.0940919037199124No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA141.0211524434719184No Hit
CATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTCGCAAATTCGACAT120.87527352297593No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA110.802334062727936No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATCATTGGGCGTAAAGAGGGAGCA110.802334062727936No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGTA110.802334062727936No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA100.7293946024799417No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA90.6564551422319475No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTCGCAAATTCGACAT90.6564551422319475No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA90.6564551422319475No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA80.5835156819839533No Hit
CATTATTAGATACCCCGGTAGTCCGGCTGACTGACTCGCAAATTCGACAT80.5835156819839533No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA80.5835156819839533No Hit
CATTATTAGATACCCTAGTAGTCCGGCTGACTGACTCGCAAATTCGACAT80.5835156819839533No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGAGTA70.5105762217359592No Hit
TACGTAGGGTCCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA70.5105762217359592No Hit
CATTAGAAACCCCGGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC60.437636761487965No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA60.437636761487965No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGACTCGCAAATTCGACAT60.437636761487965No Hit
CATTAGATACCCCTGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC60.437636761487965No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA60.437636761487965No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTCGCAAATTCGACAT60.437636761487965No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC50.36469730123997085No Hit
CATTAGAAACCCCTGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC50.36469730123997085No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTCGCAAATTCGACAT50.36469730123997085No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA50.36469730123997085No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA50.36469730123997085No Hit
CATTATTAGATACCCTGGTAGTCCGGCTGACTGACTCGCAAATTCGACAT50.36469730123997085No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA50.36469730123997085No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC50.36469730123997085No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA50.36469730123997085No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTCGCAAATTCGACAT50.36469730123997085No Hit
CATTATTAGATACCCGTGTAGTCCGGCTGACTGACTCGCAAATTCGACAT50.36469730123997085No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC50.36469730123997085No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGCAAAGGGAGCGCA50.36469730123997085No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTCGCAAATTCGACAT50.36469730123997085No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA40.29175784099197666No Hit
TACGGAGGATCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA40.29175784099197666No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA40.29175784099197666No Hit
TACAGAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA40.29175784099197666No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCA40.29175784099197666No Hit
CATTATTAGATACCCTTGTAGTCCGGCTGACTGACTCGCAAATTCGACAT40.29175784099197666No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA40.29175784099197666No Hit
TACGTAGGGGGCAAGCGTTATTCGGATTTACTGGGTGTAAAGGGAGCGTA30.2188183807439825No Hit
CATTAGATACCCGAGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC30.2188183807439825No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA30.2188183807439825No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA30.2188183807439825No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGCA30.2188183807439825No Hit
TACCGAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA30.2188183807439825No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTCGCAAATTCGACAT30.2188183807439825No Hit
CATTATTAGATACCCGAGTAGTCCGGCTGACTGACTCGCAAATTCGACAT30.2188183807439825No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA30.2188183807439825No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGTGCGTA30.2188183807439825No Hit
CATTAGAAACCCTGGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC20.14587892049598833No Hit
CATTATTAGATACCCGGGTAGTCCGGCTGACTGACTCGCAAATTCGACAT20.14587892049598833No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGACTCGCAAATTCGACAC20.14587892049598833No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATGGGGCGTAAAGAGCATGTA20.14587892049598833No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA20.14587892049598833No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAACGCA20.14587892049598833No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTTGCAAATTCGACAT20.14587892049598833No Hit
CATTAGATACCCGTGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC20.14587892049598833No Hit
TACCGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA20.14587892049598833No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTTGGTGTAAAGGGAGCGTA20.14587892049598833No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA20.14587892049598833No Hit
CATTAGATACCCTAGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC20.14587892049598833No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA20.14587892049598833No Hit
TATTAGAAACCCCAGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC20.14587892049598833No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.14587892049598833No Hit
CATATTAGATACCCCGGTAGTCCGGCTGACTGACTCGCAAATTCGACATC20.14587892049598833No Hit
CATTATTAGATACCCCGGTAGTCCGGCTGACTGAATCGCAAATTCGACAT20.14587892049598833No Hit
CATTAGATACCCGGGTAGTCCGGCTGACTGACTCGCAAATTCGACATCTC20.14587892049598833No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTCGCAAATTCGAAAT20.14587892049598833No Hit
TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTA20.14587892049598833No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCCTGTA20.14587892049598833No Hit
TACGGAGGATCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.14587892049598833No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCGCGTA20.14587892049598833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)