FastQCFastQC Report
Sun 21 May 2023
EGAF00006171480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006171480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences361
Sequences flagged as poor quality0
Sequence length200
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA8824.37673130193906No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA5013.850415512465375No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA277.479224376731302No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA164.43213296398892No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA113.0470914127423825No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCGCGCA82.21606648199446No Hit
TACAGAGACCCCGAGCGTTATCCGGAATTACTGGGCGTAAAGCGCAAGTA71.9390581717451523No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA61.662049861495845No Hit
TACCGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA61.662049861495845No Hit
TACGTAGGGTGCGAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA51.3850415512465373No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAAT51.3850415512465373No Hit
TACAGAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA51.3850415512465373No Hit
CATTAGAAACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC51.3850415512465373No Hit
TACGGAGGTGGCGAGCGTTGCTCGGATTTACTGGGTGTAAAGGGCGCGTA51.3850415512465373No Hit
CATTATTAGATACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATAAT51.3850415512465373No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATAAT41.10803324099723No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA41.10803324099723No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA41.10803324099723No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTATCTCTGGCATAAT41.10803324099723No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGACTATCTCTGGCATAAT30.8310249307479225No Hit
CATTATTAGATACCCCGGTAGTCCGGCTGACTGACTATCTCTGGCATAAT30.8310249307479225No Hit
CATTATTAGAAACCCGTGTAGTCCGGCTGACTGACTATCTCTGGCATAAT30.8310249307479225No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA30.8310249307479225No Hit
TACGCAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA20.554016620498615No Hit
CATTATTAGATACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAAT20.554016620498615No Hit
CATTATTAGATACCCTGGTAGTCCGGCTGACTGACTATCTCTGGCATAAT20.554016620498615No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.554016620498615No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGACTATCTCTGGCATAAT20.554016620498615No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTATCTCTGGCATAAT20.554016620498615No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAGAGCGTGCGCA20.554016620498615No Hit
TATTAGATACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATAATATC10.2770083102493075No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTCCTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
CAGTAGAAACCCGGGGAGTCCGGCTGAATGACTATCTCCGGTATAATATC10.2770083102493075No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTCGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
CATTAGATACCAGTGTAGTCCGGCTGACTGACTATCTCTGGCATAAAATC10.2770083102493075No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTCGGTGTAAAGGGTGCGTA10.2770083102493075No Hit
CATTAGATACCCGAGTAGTCAGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
CATTATTAGATACCCGAGTAGTCCGGCTGACTGAATATCTCTGGCATAAT10.2770083102493075No Hit
CATTAGAAACCCTAGTAGTCCGGCTGACTGATTATCTCTGGCATAACATC10.2770083102493075No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTATCTCTGGCATAAA10.2770083102493075No Hit
CATTATTAGATACCCCTGTAGTCAGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAATATC10.2770083102493075No Hit
CAGTAGATACCCTTGGAGTCCGGATGAATGACTATCTAAGGAATAATATC10.2770083102493075No Hit
TACAGAGGGTGCAAGCGTTATTCGGAATTACTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
CGAGTTATTAGATACCCGTGTAGTCCGGCTGACTGACTATCTCTGGCATA10.2770083102493075No Hit
CATTATTAGAAACCCTCGTAGTCCGGCTGACTGACTATCTCTGGCATATC10.2770083102493075No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
CATTAGATACCCGAGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTATTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTG10.2770083102493075No Hit
ACAATTAGATACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAATC10.2770083102493075No Hit
TACGTAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA10.2770083102493075No Hit
CATTATTCGATACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATCAT10.2770083102493075No Hit
TACGAAGGGTGCAAGCGTTAACCGGAATTACTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAAC10.2770083102493075No Hit
CATTAGATACCCTGGTAGTCCGGCTGACTGACTATCTCTGGCATAAACTC10.2770083102493075No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGCCTATCTCTGGCATAAT10.2770083102493075No Hit
CATTAGAAACCCGAGTAGTCCGGCTGACCGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
CATTAGATACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAGAGCGCGCGTA10.2770083102493075No Hit
CATTATTAGAAACCATTGTAGTCCGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
CATTAGATACCCTGGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
CATTATTAGATACCCGGGTAGTCCGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTATCTCTGGCATATCTCG10.2770083102493075No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
CATTATTAGATACCCCCGTAGTCCGGCTGACTGCCTATCTCTGGCATAAT10.2770083102493075No Hit
TACGTAGGGTGCGAGTGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.2770083102493075No Hit
CATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
TACAGAGGGCGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA10.2770083102493075No Hit
TCGATTAGAAACCCCAGTAGTCCGGCTGACTGACTATACCTGGCATAATC10.2770083102493075No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGAATATCTCTGGCATAAT10.2770083102493075No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGCCTATCTCTGGCATATC10.2770083102493075No Hit
CATTATTAGATACCATTGTAGTCCGGCTGACTGAATATCTCTGGCATAAT10.2770083102493075No Hit
CATTATTAGAAACCCTGGTAGTCCGGCCGACTAACTATCTCTGGCATAAT10.2770083102493075No Hit
TACCGAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
ACAATTAGAAACCTGAGTAGTCCGGCTGACTGACTATCTCTGGCATAATC10.2770083102493075No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTATCTCTGGCATAAACTC10.2770083102493075No Hit
CATTAGATACCCTAGTAGTCCGGCTGACTGACTCTCTCTGGCATAATCTC10.2770083102493075No Hit
CATTATTAGAAACCCGGGTATCCGGCTGACTGACTATCTCTGGCATAATC10.2770083102493075No Hit
CATTCTTCGAAACCCTGGTAGTCCGGCTGACTGACTCTCTCTGGCCTAAT10.2770083102493075No Hit
TATTAGATACCCCAGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
GGTTGTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGTCGACTGCT10.2770083102493075No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGTGCGCA10.2770083102493075No Hit
ACAATTAGATACCCTGGTAGTCCGGCTGACTGACTATCTCTGGCATAATC10.2770083102493075No Hit
CATTAGAAACCCCGGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
CATTATTAGGAACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTATCTCTGGCATAAA10.2770083102493075No Hit
TATTCGAAACCCCAGTAGTCCGGCTGACTGACTATCTCTGGCATAATCTC10.2770083102493075No Hit
ATGACGTAATCACGTTCTTGGTCAGTATGCAAATTAGCATAAGCAGCTTG10.2770083102493075No Hit
CATTATTCGATACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATAAT10.2770083102493075No Hit
TACAGAGGGTGCAAGCGTTAATCGGCATTATTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
CATTATTAGATACCCCGGTAGTCCGGCTGACTGACTCTCTCTGGCATAAT10.2770083102493075No Hit
TACAGAGGGTGTAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2770083102493075No Hit
TATGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.2770083102493075No Hit
TACGCAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA10.2770083102493075No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTATCTCTGGCATAAA10.2770083102493075No Hit
CATTATTAGATACCCGAGTAGTCCGGCTGACTGACTCTCTCTGGCATAAT10.2770083102493075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)