FastQCFastQC Report
Tue 30 May 2023
EGAF00006171484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006171484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1178
Sequences flagged as poor quality0
Sequence length200
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA32927.928692699490664No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA806.791171477079796No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA766.451612903225806No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA584.923599320882852No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA484.074702886247878No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA342.886247877758913No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA252.122241086587436No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA242.037351443123939No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA201.697792869269949No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA171.4431239388794566No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA151.2733446519524618No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA151.2733446519524618No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA121.0186757215619695No Hit
TACGTAGGTTGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA100.8488964346349746No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA100.8488964346349746No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA100.8488964346349746No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA90.7640067911714771No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA90.7640067911714771No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA80.6791171477079796No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA70.5942275042444821No Hit
TACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTA70.5942275042444821No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTA70.5942275042444821No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT70.5942275042444821No Hit
CATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT60.5093378607809848No Hit
TACGTAGGTGACAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTA60.5093378607809848No Hit
AACGTAGGTCACAAGCGTTGTCAGGAATTACTGGGTGTAAAGGGAGCGCA60.5093378607809848No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA50.4244482173174873No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTATTGGGTGTAAAGGGTGCGTA50.4244482173174873No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATGACTGGGTGTAAAGGGAGCGTA50.4244482173174873No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT40.3395585738539898No Hit
TACGTAGGATGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA40.3395585738539898No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT40.3395585738539898No Hit
TACGTAGTGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA40.3395585738539898No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA40.3395585738539898No Hit
CATTATTAGATACCCGAGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT40.3395585738539898No Hit
TACGTAGGGTGCGAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA40.3395585738539898No Hit
TACGTAGGTGGCGAGTGTTGTCCGGAATTATTGGGCGTAAAGGGAGCGCA40.3395585738539898No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA40.3395585738539898No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA40.3395585738539898No Hit
CATTAGAAACCCCTGTAGTCCGGCTGACTGACTCGATTTCTCAAGATCTC40.3395585738539898No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGTA30.2546689303904924No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA30.2546689303904924No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATGATTGGGCGTAAAGGGCGTGTA30.2546689303904924No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT30.2546689303904924No Hit
TACGTAGGGGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGCGCGCGCA30.2546689303904924No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGAGCGCA30.2546689303904924No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT30.2546689303904924No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGCA30.2546689303904924No Hit
TACGGAAGGTCCGGGCGTTGTCCGGATTTATTGGGTTTAAAGGGAGCGTA30.2546689303904924No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA30.2546689303904924No Hit
CATTATTAGAAACCCGTGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT30.2546689303904924No Hit
TACGGAGGTGGCGAGCGTTGCTCGGATTCATTGGGTGTAAAGGGCAAGTA30.2546689303904924No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA30.2546689303904924No Hit
CATTATTAGATACCCTGGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT30.2546689303904924No Hit
CATTAGATACCCGAGTAGTCCGGCTGACTGACTCGATTTCTCAAGATCTC30.2546689303904924No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCA30.2546689303904924No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT30.2546689303904924No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGTGAGCGTA30.2546689303904924No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGGGCGTA30.2546689303904924No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT20.1697792869269949No Hit
TACGGAGGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.1697792869269949No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT20.1697792869269949No Hit
TACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCGCGTA20.1697792869269949No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA20.1697792869269949No Hit
TACGTGTGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA20.1697792869269949No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA20.1697792869269949No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA20.1697792869269949No Hit
CATTAGATACCCTAGTAGTCCGGCTGACTGACTCGATTTCTCAAGATCTC20.1697792869269949No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTCGATTTCTCAAGAT20.1697792869269949No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA20.1697792869269949No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA20.1697792869269949No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTCGATTTCTCAAGATCTC20.1697792869269949No Hit
TACGCATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA20.1697792869269949No Hit
CATTAGAAACCCTAGTAGTCCGGCTGACTGACTCGATTTCTCAAGATCTC20.1697792869269949No Hit
TACATAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGTA20.1697792869269949No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCATA20.1697792869269949No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA20.1697792869269949No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAGAGGGAGCGTA20.1697792869269949No Hit
TACGGAGGGGGCTAGCGTTATTCGCAATTACTGGGCGTAAAGCGCACGTA20.1697792869269949No Hit
CATTAGATACCCCAGTAGTCCGGCTGACTGACTCGATTTCTCAAGATCTC20.1697792869269949No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTAGTGGGTTTAAAGGGAGCGTA20.1697792869269949No Hit
TACGGAGGGGGCTAGCGTTATTCGGAATTACTGGGCGTAAAGCGCACGTA20.1697792869269949No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGTA20.1697792869269949No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)