FastQCFastQC Report
Sun 21 May 2023
EGAF00006171486

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006171486
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154
Sequences flagged as poor quality0
Sequence length200
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA4629.87012987012987No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA106.493506493506493No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA74.545454545454546No Hit
CATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT53.2467532467532463No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT42.5974025974025974No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT31.948051948051948No Hit
TACAGAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA31.948051948051948No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT21.2987012987012987No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT21.2987012987012987No Hit
CATTATTAGATACCCGAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT21.2987012987012987No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC21.2987012987012987No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA21.2987012987012987No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT21.2987012987012987No Hit
TACGTAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA21.2987012987012987No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC21.2987012987012987No Hit
CATTATTAGATACCCTTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT21.2987012987012987No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA21.2987012987012987No Hit
CATTAGAAACCCCGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC21.2987012987012987No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA21.2987012987012987No Hit
CATTAGAAACCCCTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC21.2987012987012987No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC21.2987012987012987No Hit
GTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGT10.6493506493506493No Hit
CATTAGAAACCCCAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAAATC10.6493506493506493No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.6493506493506493No Hit
TACGTAGGGTGCGAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA10.6493506493506493No Hit
CATTATTCGAAACCCCTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT10.6493506493506493No Hit
CATTAGATACCCCGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
ACAATTAGAAACCCCGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAAC10.6493506493506493No Hit
CATTAGATACCCCTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
TTAGATACCCTGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTCGT10.6493506493506493No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAACTC10.6493506493506493No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGAATTGTGCTGTGTAGAT10.6493506493506493No Hit
CATTAGATACCCTAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
CATTATTCGAAACCCCGGTAGTCCGGCTGACTGCCTTGTGCTGTGTAGAT10.6493506493506493No Hit
CATTAGATACCCTTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
TACCGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.6493506493506493No Hit
TCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGCCTTCTACCACATCTA10.6493506493506493No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.6493506493506493No Hit
CATTATTAGAAACCCCTGAGTCCGGCTGACTGACTTGTGCTGTGTAGATC10.6493506493506493No Hit
CATTAGAAACCCGAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
CATTATTAGAAACCTCAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT10.6493506493506493No Hit
TTAGAAACCCCAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTCGT10.6493506493506493No Hit
CATTAGATACCCAGTAGTCCGGCTGACTGACTTGTGCTGTGTCGATATCG10.6493506493506493No Hit
CATTAGATACCCGAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.6493506493506493No Hit
CATTATTCGATACCCTTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT10.6493506493506493No Hit
TTAATAACCTGATTCAGCGAAACCAATCCGCGGCATTTAGTAGCGGTAAA10.6493506493506493No Hit
TACATAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.6493506493506493No Hit
TTAGATACCCGTGTAATCCGGCTGACTGACTTGTGCTGTGTAGATCTCGT10.6493506493506493No Hit
CAGTAGAAACCCGGGGAGTCCGGCTGACTGACTTGTGCGGAGTAGAAATC10.6493506493506493No Hit
ACAATTAGAAACCCCTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAAC10.6493506493506493No Hit
GAGATTAGAAACCCTAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATC10.6493506493506493No Hit
TACGAAGGGGGCTAGCGTTATTCGGAATCACTGGGCGTAAAGCGCACGTA10.6493506493506493No Hit
TACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGCGCGTA10.6493506493506493No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGCGTAAAGGGAGCGTA10.6493506493506493No Hit
ACAATTAGAAACCCCAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATA10.6493506493506493No Hit
TTAGATACCCGAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTCGT10.6493506493506493No Hit
CATTAGAAACCCGAGTAGTCCGGCTGACTGACTTGTGCTGTGTAGCTCTC10.6493506493506493No Hit
CATTAGATACCCCGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGACTTC10.6493506493506493No Hit
TACCATAAACGCAAGCCTCAACGCAGCGACGAGCACGAGAGCGGTCAGTA10.6493506493506493No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATCACTGGGCGTAAAGCGCACGTA10.6493506493506493No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT10.6493506493506493No Hit
CATTAGAAACCCTAGTAGACCGGCTGACTGACTTGTGCTGTGTAGACCTC10.6493506493506493No Hit
CATTAGATACCCGTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
CATTATTAGAAACCCGTGTAGTCCGGCTGACTGACTTGTGCTGTGTAGAT10.6493506493506493No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.6493506493506493No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCATA10.6493506493506493No Hit
CATTAGAAACCCTGGTAGTCCGGCTGACTGACTTGTGCTGTGTAGATCTC10.6493506493506493No Hit
GACGAAGGGGGCTAGCGTTGTTCGGAATCACTGGGCGTAAAGCGCCCGTA10.6493506493506493No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)