FastQCFastQC Report
Tue 30 May 2023
EGAF00006171937

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006171937
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118
Sequences flagged as poor quality0
Sequence length200
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA1311.016949152542372No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACAATCCAGTA97.627118644067797No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACAGTCCAGCA65.084745762711865No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAATGTCAGTTGCAGCTTAGCA65.084745762711865No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG54.23728813559322No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA54.23728813559322No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTATCGTCCAGTA54.23728813559322No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAACGTCAGATATAGTTTGGTA43.389830508474576No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGTGTCAGTTTCAGTCCAGTA43.389830508474576No Hit
CCTATTTGCTCCCCACGCTTTCGTGCTTCAGTGTCAGAATCCAGACCAGA32.5423728813559325No Hit
CCTGTTTGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA32.5423728813559325No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTTGCAGTCCAGTG32.5423728813559325No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGCA21.694915254237288No Hit
CCTGTTTGCTCCCCACACTTTCGAGCCTCAGCGTCAGTTAAAGCCCAGCA21.694915254237288No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA21.694915254237288No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTGACGGCCCAGAG21.694915254237288No Hit
CCTGTTCGCTCCCCCAGCTTTCGCGCCTCAGCGTCGGTCTCGGCCCAGAG21.694915254237288No Hit
CCTATTTGCTCCCCACGCTTTCGGGACTGAGCGTCAGTTATGCGCCAGAT21.694915254237288No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGCA21.694915254237288No Hit
CCTATTTGCTCCCCACACTTTCGTGCTTCAGCGTCAGATTCCGTACCATA10.847457627118644No Hit
CCTGATTCCTCCCCACGCTTTCCAGGCACACCGTCAGTTATCGTCCAGTA10.847457627118644No Hit
CCTGTCCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTGACGGCCCAGAG10.847457627118644No Hit
CCCGTCTGCTACCCTGGCTTTCGCATCTCAGCGTCAGACACAGTCCAGAA10.847457627118644No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTGACCGCCCAGAG10.847457627118644No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTGACAGTCTAGTG10.847457627118644No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTAACAGTCTAGTG10.847457627118644No Hit
CCCGTTTGCTACCCTGGCTTTCGCATCTCAGCGTCAGACACAGTCCAGAA10.847457627118644No Hit
CCTGTTTGCTACCCACACTTTCGAGCATGAACGTCAGTTACGGATTAGTG10.847457627118644No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACACTCCAGTG10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACTGTCCAGTA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTAATCGCCTGGCA10.847457627118644No Hit
CCTGTTTGCTCCCCGCGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG10.847457627118644No Hit
CCTAATCGCGACCGACAGTTACGCGCCTCACCCGACGTCTAAGCCTGGTC10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGTGTCAGTAACAGTCCAGCA10.847457627118644No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGTCA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATCAGTGTCAGTTTCAGTCCAGTA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCATCAGTGTCAGTTGCAGTCCAGTG10.847457627118644No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTCATGGCTTGGCA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGTG10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTGAACGTCAGTTACTGTCTAGCA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGTGACTCAGTGTCAGTTTCAGTCCAGTA10.847457627118644No Hit
CCTGTTTGCTCCCCACACTTTCGAGCCTCAGCGTCAGTTACAGCCCAGCA10.847457627118644No Hit
CCTGTTCGCTACCCACGCTCTCGTGCATCAGCGTCAGTTACAGTCTGGTA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGCA10.847457627118644No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA10.847457627118644No Hit
CCTGTTCGCTCCCCCCGCTTTCGCGCCTCAGCGTCGGTCTCGGCCCAGAG10.847457627118644No Hit
CCTGTCTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA10.847457627118644No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAACGTCAGCTATAGTTTAGTA10.847457627118644No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGCGTCAGTTACAATCCAGTA10.847457627118644No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACGATCCAGTA10.847457627118644No Hit
CCTACCTACCCTCCACGCTTACCCGCCCTCCCCGCACATATCCTCCTAAT10.847457627118644No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGTGTCAGTTACAGCCCAGCA10.847457627118644No Hit
CCTGTTTGATACCCGCACTTTCGAGCCTCAGCGTCAGTTCTTCCCCAGCA10.847457627118644No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGCCCATTA10.847457627118644No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGCG10.847457627118644No Hit
CCTGTTTGCTCCCCACACTTTCGTGACTCAGTGTCAGTTTCAGTCCAGTT10.847457627118644No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)