FastQCFastQC Report
Wed 31 May 2023
EGAF00006172484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006172484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14765781
Sequences flagged as poor quality0
Sequence length126
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATATCGACCATCTCGTA3635192.4619016088617327TruSeq Adapter, Index 15 (97% over 38bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)