FastQCFastQC Report
Sun 21 May 2023
EGAF00006172570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006172570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1121
Sequences flagged as poor quality0
Sequence length200
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA1029.099018733273862No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA686.066012488849242No Hit
TACGGAGGGTGCGAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTA564.9955396966993755No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA343.033006244424621No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA221.9625334522747548No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATCATTGGGCGTAAAGAGGGAGCA201.784121320249777No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA191.694915254237288No Hit
TACGTAGGGTGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA171.5165031222123104No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA161.4272970561998217No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA110.9812667261373774No Hit
TACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTA90.8028545941123997No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA90.8028545941123997No Hit
CATTATTAGAAACCCTAGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT90.8028545941123997No Hit
CATTATTAGAAACCCGAGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT80.7136485280999109No Hit
CATTATTAGATACCCTGGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT80.7136485280999109No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA80.7136485280999109No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA70.6244424620874219No Hit
CATTATTAGAAACCCCGGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT70.6244424620874219No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA70.6244424620874219No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATAATTGGGCGTAAAGGGCGCGTA70.6244424620874219No Hit
CATTATTAGAAACCCCAGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT60.535236396074933No Hit
TACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGAGCGCA60.535236396074933No Hit
CATTAGAAACCCTTGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC60.535236396074933No Hit
CATTAGAAACCCGTGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC60.535236396074933No Hit
CATTATTAGATACCCTAGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT60.535236396074933No Hit
CATTATTAGATACCCGGGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT60.535236396074933No Hit
CATTAGAAACCCCTGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC50.44603033006244425No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATCATTGGGCGTAAAGCGGGAGCA50.44603033006244425No Hit
TACGTAGGGAGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA50.44603033006244425No Hit
CATTATTAGAAACCCCTGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT50.44603033006244425No Hit
CATTATTAGAAACCCTTGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT50.44603033006244425No Hit
CATTAGAAACCCTAGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC50.44603033006244425No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA40.35682426404995543No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGTA40.35682426404995543No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCATGCGCA40.35682426404995543No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA40.35682426404995543No Hit
CATTATTAGAAACCCTGGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT40.35682426404995543No Hit
CATTATTAGATACCCTTGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT40.35682426404995543No Hit
GACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCGCGTA40.35682426404995543No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGCA40.35682426404995543No Hit
CATTAGAAACCCTGGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC40.35682426404995543No Hit
CATTAGAAACCCCGGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC40.35682426404995543No Hit
CATTATTAGATACCCCTGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT40.35682426404995543No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA40.35682426404995543No Hit
CATTAGATACCCTTGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC30.2676181980374665No Hit
CATTAGAAACCCGAGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC30.2676181980374665No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA30.2676181980374665No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGTA30.2676181980374665No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATCACTGGGCGTAAAGCGCACGTA30.2676181980374665No Hit
CATTAGATACCCCAGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC30.2676181980374665No Hit
CATTAGATACCCGGGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC30.2676181980374665No Hit
CATTATTAGATACCCCGGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT30.2676181980374665No Hit
CATTAGATACCCGTGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC30.2676181980374665No Hit
TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA30.2676181980374665No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA30.2676181980374665No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT30.2676181980374665No Hit
TACGTAAGGACCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGTACGTA30.2676181980374665No Hit
TACGGAGGATCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA30.2676181980374665No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA30.2676181980374665No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTCGTA30.2676181980374665No Hit
CATTATTAGATACCCGAGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT30.2676181980374665No Hit
TACGTAGGGTGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGGGCTCGTA30.2676181980374665No Hit
TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTA30.2676181980374665No Hit
CATTATTAGAAACCCGGGTAGTCCGGCTGACTGACTCAGCACTAAGCGAT30.2676181980374665No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGAGTGTAAAGGGAGCGTA20.17841213202497772No Hit
CACCATTATCGAACTCAACGCCCTGCATACGAAAAGACAGAATCTCTTCC20.17841213202497772No Hit
AACGTAGGTCACTAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA20.17841213202497772No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGTGTA20.17841213202497772No Hit
TACGTATGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.17841213202497772No Hit
CATTAGATACCCGAGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC20.17841213202497772No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGTGCGTA20.17841213202497772No Hit
CATTATTAGATACCCCAGTAGTCCGGCTGACTGAATCAGCACTAAGCGAT20.17841213202497772No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA20.17841213202497772No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGCA20.17841213202497772No Hit
CATTAGAAACCCGGGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC20.17841213202497772No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCA20.17841213202497772No Hit
CATATTAGATACCCCTGTAGTCCGGCTGACTGACTCAGCACTAAGCGATC20.17841213202497772No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.17841213202497772No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.17841213202497772No Hit
TACGGGAGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTCCGCA20.17841213202497772No Hit
CATTAGATACCCTGGTAGTCCGGCTGACTGACTCAGCACTAAGCGATCTC20.17841213202497772No Hit
TACGTAGGGTGCGTGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA20.17841213202497772No Hit
GGTAATTATACTCATCGCGAATATCCTTAAGAGGGCGTTCAGCAGCCAGC20.17841213202497772No Hit
GACGAAGGATGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.17841213202497772No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA20.17841213202497772No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGCGCGCA20.17841213202497772No Hit
TACGTAGGTGACAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTA20.17841213202497772No Hit
TACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA20.17841213202497772No Hit
TACGGAGGGCGCGAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTA20.17841213202497772No Hit
CCGACTGAATGCCAGCAATCTCTTTTTGAGTCTCATTTTGCATCTCGGCA20.17841213202497772No Hit
TATTCTGGCGTGAAGTCGCCGACTGAATGCCAGCAATCTCTTTTTGAGTC20.17841213202497772No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGCA20.17841213202497772No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)