FastQCFastQC Report
Sun 21 May 2023
EGAF00006172572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006172572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3767
Sequences flagged as poor quality0
Sequence length200
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA84722.484735864082825No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA39710.53889036368463No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA2356.23838598354128No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA1654.380143350146005No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGAGCGTA1594.2208654101406955No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGTGCGTA1092.893549243429785No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA932.4688080700822934No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATCATTGGGCGTAAAGAGGGAGCA721.9113352800637111No Hit
TACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA701.8582426333952746No Hit
TACGGAGGGTGCGAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTA621.645872046721529No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA511.3538624900451288No Hit
GACGTAGGATGCAAGCGTTGTCCGGATTCATTGGGCGTAAAGAGTTCGTA481.274223520042474No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATCACTGGGCGTAAAGCGCACGTA411.0883992567029468No Hit
GACAGAGGGTGCGAACGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTA350.9291213166976373No Hit
GACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA300.7963897000265464No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGAGTTTAAAGGGTGCGTA200.5309264666843642No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATCATTGGGCGTAAAGCGGGAGCA170.4512874966817096No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCA160.4247411733474914No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCCCGCA120.3185558800106185No Hit
AACGTAGGTCGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA100.2654632333421821No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTTACTGGGTTTAAAGGGTGCGTA100.2654632333421821No Hit
TACGTGGGGTGCAAGCGTTATCCGGATTTACTGGGCGTAAAGCGTACCGT100.2654632333421821No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA90.2389169100079639No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA80.2123705866737457No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA80.2123705866737457No Hit
TACGAAGGGGGCCAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA70.18582426333952748No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA60.15927794000530926No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATCACTGGGCGTAAAGCGCCCGTA60.15927794000530926No Hit
GACGTAGGATGCAAGCGTTGTCCGGATTCATTGGGCGTAAAGCGTTCGTA50.13273161667109104No Hit
TACGAAGGGGGCCAGCGTTGCTCGGAATTACTGGGCGTAAAGGGAGCGTA50.13273161667109104No Hit
TACGTAGGGGGCAAGCGTTATCCGGATCTACTGGGTGTAAAGGGAGCGTA40.10618529333687285No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGAGTGTAAAGGGAGCGTA40.10618529333687285No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAGGGTGCGTAG40.10618529333687285No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGTGCGTA40.10618529333687285No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAGGCGTGCGCA40.10618529333687285No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGAGCGTAAAGGGCGCGTA40.10618529333687285No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA40.10618529333687285No Hit
TACGAAGGGGGCTAGCGTTGCGCGGAATTACTGGGCGTAAAGGGCGCGTA40.10618529333687285No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA40.10618529333687285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)