FastQCFastQC Report
Sun 21 May 2023
EGAF00006172574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006172574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4779
Sequences flagged as poor quality0
Sequence length200
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA71414.940364092906467No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA64813.559322033898304No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA3066.4030131826742No Hit
TACGTAGGGTCCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA1523.180581711655158No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA1302.720234358652438No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA1262.6365348399246704No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTA1182.4691358024691357No Hit
TACGGAGGGTGCGAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTA1002.092487968194183No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCGCGCA931.94601381042059No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGTA911.9041640510567064No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA901.8832391713747645No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGGGCGCA761.590290855827579No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA751.5693659761456373No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA691.4438166980539862No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGTGCGTA691.4438166980539862No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA631.3182674199623352No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA511.0671688637790333No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA330.6905210295040803No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA230.481272232684662No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGCA150.31387319522912743No Hit
GACAGAGGGTGCGAACGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTA150.31387319522912743No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGCGCACGTA150.31387319522912743No Hit
TACGTAGGTGGCAAGCGTTGTCAGGAATTATTGGGCGTAAAGCGCGCGCA140.2929483155471856No Hit
TACAGAGGGTGCGAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTA130.2720234358652438No Hit
TACGGAGGGTGCAAGCGTTGCTCGGAATTATTGGGCGTAAAGGGTAGGTA110.2301736765013601No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGTGCGCA110.2301736765013601No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA100.2092487968194183No Hit
TACGAAGGGGGCCAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA90.18832391713747645No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTTACTGGGTTTAAAGGGTGCGTA90.18832391713747645No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGAGTTTAAAGGGTGCGTA80.16739903745553464No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCGCGTA70.1464741577735928No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGAGCGTAAAGGGCGCGTA70.1464741577735928No Hit
TACGGAGGGTGCAAGCATTGATCGGAATTACTGGGCGTAAAGGGCGCGTA70.1464741577735928No Hit
TACGTAGAAGACTAGTGTTAATCATCTTTATTAGGTTTAAAGGGTACCTA60.12554927809165098No Hit
TACGAAGGGGGCTAGCGTTGCGCGGAATTACTGGGCGTAAAGGGCGCGTA60.12554927809165098No Hit
CACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCA50.10462439840970915No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGAGCGTAAAGCGTGCGCA50.10462439840970915No Hit
TACGGAGGGTGCGAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA50.10462439840970915No Hit
TACGGAGGGTGCTAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA50.10462439840970915No Hit
CATTAGATACCCTGGTAGTCCGGCTGACTGACTGAAGTTGGAAGTATCTC50.10462439840970915No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGAGCGTAAAGCGCGCGCA50.10462439840970915No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA50.10462439840970915No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)