FastQCFastQC Report
Tue 7 May 2024
EGAF00006173443

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006173443
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1035903073
Total Bases156.4 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT15150720.14625615460453414No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC14747300.1423617748067053No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)