FastQCFastQC Report
Wed 8 Feb 2023
EGAF00006173814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006173814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2066251
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACTTCACCACACAGAGGTAGGTGGCTGAATCACTGAGCTTGGAGTCTCT245311.1872226559116004No Hit
TCACTCTGCAAGTGTCTGGGGAGCACTGTGCGCTCATTGCACAGAGGTAG212351.0277067016543489No Hit
GTGTTGTCTGGGGAGCACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGA190810.9234599281500651No Hit
GTGTCACTGCCAAAGAGTTTCTTATAATAAGGACCCCAGGTGGCACAGTA139820.6766844879929883No Hit
TAGTAATGAAATAAGTGGTCGGTATTCTTGGAACTTCCAGAAATCCACCA127990.6194310371779614No Hit
AATGTGGTGGAGCAGAATTCTGGACCCCTCAGTGTTCCAGAGGGAGCCAT90840.43963681082308004No Hit
GATCTCACTGTGCGCTCATTGCACAGAGGTAGGTGGCTGAATCACTGGGC79120.38291572514665445No Hit
GACTACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGAATCACTGGGCTG60060.29067136567629004No Hit
TCGTTTACATTATTCCAGTTTAATAATTTCCTGCCTTCCCTCTATTACCT38400.18584383020262302No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)