FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006174610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006174610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15461253
Sequences flagged as poor quality0
Sequence length50
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGAATCCGAGTGTAGATC269630.17439078191140137Illumina Single End PCR Primer 1 (96% over 33bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG216430.13998218643728294No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)