FastQCFastQC Report
Tue 23 Aug 2022
EGAF00006175567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006175567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463150
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAGAGCTGTTCCTCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAG83661.8063262441973444No Hit
GGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATA75611.6325164633488072No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6160.133002267084098No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)