FastQCFastQC Report
Tue 23 Aug 2022
EGAF00006175585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006175585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478998
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAGAGCTGTTCCTCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAG92531.9317408423417215No Hit
GGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATA80281.6759986471759798No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5750.12004225487371556No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)