FastQCFastQC Report
Tue 28 Jun 2022
EGAF00006176533

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006176533
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences963510989
Sequences flagged as poor quality0
Sequence length151
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATAATGGTGATGAATTGTTTGTGTTTATTTTGTGTGTATGTGTAGGAAA44546130.46233131234167996No Hit
TATAATGGTGAGGTGTTTATTTTGAAGGAGTTGTTAGTGATAATTGGAGT44526980.46213256006777104No Hit
TATAATGGTGAGTATGTTGGATTTTGTAGGATATTTTTGTTTTTTTGTTT9980770.10358750563248635No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)