FastQCFastQC Report
Tue 28 Jun 2022
EGAF00006176537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006176537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences929268172
Sequences flagged as poor quality0
Sequence length151
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTTTTGATGGTGTTTATTTTGAAGGAGTTGTTAGTGATAATTGGAGT78093950.8403811983781148No Hit
GGTTTTTTGATTGAATTGTTTGTGTTTATTTTGTGTGTATGTGTAGGAAA58422780.6286966643252256No Hit
GGTTTTTTGATGTATGTTGGATTTTGTGGGATATTTTTGTTTTTTTGTTT23099290.24857506902754442No Hit
GGTTTTTTGATGTATGTTGGATTTTGTAGGATATTTTTGTTTTTTTGTTT10028080.10791373579940065No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)