FastQCFastQC Report
Sun 10 Jul 2022
EGAF00006176543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006176543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences961547188
Sequences flagged as poor quality0
Sequence length151
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAATTTAGAAGGTGTTTATTTTGAAGGAGTTGTTAGTGATAATTGGAGT67505940.7020554044821355No Hit
AGAATTTAGAATGAATTGTTTGTGTTTATTTTGTGTGTATGTGTAGGAAA46566690.48428918082385364No Hit
AGAATTTAGAAGTATGTTGGATTTTGTAGGATATTTTTGTTTTTTTGTTT25456460.26474478130344237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)