FastQCFastQC Report
Wed 22 May 2024
EGAF00006176683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006176683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77938669
Total Bases10.9 Gbp
Sequences flagged as poor quality0
Sequence length35-150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1603810.20577846922174153No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG955990.12265926686533485No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)