FastQCFastQC Report
Sat 25 May 2024
EGAF00006177427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006177427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118882501
Total Bases12 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN19299951.6234475080567154No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)