FastQCFastQC Report
Wed 1 May 2024
EGAF00006178638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006178638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45081445
Total Bases3.3 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN11415322.5321548588338283No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)