FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006184253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006184253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13104640
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTGACGACTTGAAAAA197260.1505268362961516No Hit
CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTAGAAATGTCCACTGTAGGACGTGGAA151080.11528740965032233No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)