FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006184363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006184363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1436923
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTATTTAATCCCAGAATGCCTCTGTGTCGCATCAGACTTGCCGCACCG30630.2131638229745087No Hit
AGGCGCGGCTCCGCCCCGCGCGCACTATTTAATCCCAGAATGCCTCTGTG29980.208640268128494No Hit
AGAAGTGCGCAGGCGCGGCTCCGCCCCGCGCGCACTATTTAATCCCAGAA28370.19743577074067295No Hit
CTATTTAATCCCAGAATGCCTCTGTGTCGCATCAGACTTGCCGCACCGTT27440.19096360765329806No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27360.19040686244148086No Hit
CTGCGCACTTCTGCCGTGCTTACGCCCTCTAGCGAGGCAGAAGTGCGCAG22840.15895075797380934No Hit
AGTCTCCATGCTCTCCATCTCCAGCACTTGAAAAGATGCAGCCGCGGCCG21940.15268737434086585No Hit
ACTATTTAATCCCAGAATGCCTCTGTGTCGCATCAGACTTGCCGCACCGT21680.15087795240246No Hit
ATTTAATCCCAGAATGCCTCTGTGTCGCATCAGACTTGCCGCACCGTTCG20760.14447538246656222No Hit
CTGCGCACTTCTGCCTCGCTAGAGGGCGTAAGCACGGCAGAAGTGCGCAG20730.1442666030121308No Hit
GCACTATTTAATCCCAGAATGCCTCTGTGTCGCATCAGACTTGCCGCACC19590.13633298374373576No Hit
TATTTAATCCCAGAATGCCTCTGTGTCGCATCAGACTTGCCGCACCGTTC18780.13069593847408664No Hit
CTGCATCTTTTCAAGTGCTGGAGATGGAGAGCATGGAGACTGCCGTCGCC18740.13041756586817804No Hit
CCCCGCGCGCACTATTTAATCCCAGAATGCCTCTGTGTCGCATCAGACTT18080.12582441787068618No Hit
CTCTGTGTCGCATCAGACTTGCCGCACCGTTCGGAAGCTGAGGGGGCCGG18050.12561563841625473No Hit
GGCTCCGCCCCGCGCGCACTATTTAATCCCAGAATGCCTCTGTGTCGCAT17660.1229015055086459No Hit
CTCCGCCCCGCGCGCACTATTTAATCCCAGAATGCCTCTGTGTCGCATCA16690.11615096981536241No Hit
ATCTTTTCAAGTGCTGGAGATGGAGAGCATGGAGACTGCCGTCGCCATCT16300.11343683690775358No Hit
AGAATGCCTCTGTGTCGCATCAGACTTGCCGCACCGTTCGGAAGCTGAGG15590.10849572315287598No Hit
AGCCGCGGCCGCAGCGGCAGCTGCCGCCGCCACAGCCGCCGCCATCTTGA15090.1050160655790185No Hit
ATCTTGACGCCGCCGTACCGGCCCCCTCAGCTTCCGAACGGTGCGGCAAG14880.10355460939799835No Hit
ATCTCCAGCACTTGAAAAGATGCAGCCGCGGCCGCAGCGGCAGCTGCCGC14650.10195396691402392No Hit
GTCAAGATGGCGGCGGCTGTGGCGGCGGCAGCTGCCGCTGCGGCCGCGGC14490.10084047649038953No Hit
ATCAGACTTGCCGCACCGTTCGGAAGCTGAGGGGGCCGGTACGGCGGCGT14460.10063169703595808No Hit
CAGAAGTGCGCAGGCGCGGCTCCGCCCCGCGCGCACTATTTAATCCCAGA14450.10056210388448092No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)