FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006184410

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006184410
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12680764
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA148740.1172957717689565No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA140570.11085294229906022No Hit
CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA138300.10906282933741215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)