FastQCFastQC Report
Fri 1 Jul 2022
EGAF00006199869

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006199869
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10726373
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTGTCAGTTTAGGTTAGGCGCCATGCATCTCGAGATTTAAATGCATGC545880.5089138705133599No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTTCAGCTGGTGTAGATCT124880.11642332408168166Illumina Single End PCR Primer 1 (96% over 32bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)