FastQCFastQC Report
Fri 1 Jul 2022
EGAF00006200186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006200186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12533205
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG289380.23089066204534275No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCGCTTAGATCTCGTAT237030.18912161733570942TruSeq Adapter, Index 10 (97% over 40bp)
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA130780.10434681312561313No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)