FastQCFastQC Report
Tue 5 Jul 2022
EGAF00006204859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006204859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences367087860
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGAGAACAATCTCGTAT76839782.0932258560661743TruSeq Adapter, Index 2 (97% over 36bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCTGATCTCGTAT4652770.1267481305429169TruSeq Adapter, Index 7 (97% over 39bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)