FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006204914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006204914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32793930
Sequences flagged as poor quality0
Sequence length95
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT441330.13457673417001256No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA368280.11230127038753819No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG349220.10648921919391789No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC340460.10381799314690249No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)