FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006204925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006204925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55657212
Sequences flagged as poor quality0
Sequence length95
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1066950.1917002238631716No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT843080.1514772245508812No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT785830.14119104636430585No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA780860.14029808032784682No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT749100.1345917219137746No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA744600.1337832013576246No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG733780.13183915859817052No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT685240.12311791686583223No Hit
GTCTGAATGTCCGTACTTCTCCAAAATTTCTTTCTCATGGCAAAGTTCTT674330.12115770369525516No Hit
GCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTG626170.11250473703210287No Hit
GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC622760.11189205812177584No Hit
ACCATGAAGTGGGTGGAATCAATTTTTTTAATTTTCCTACTAAATTTTAC619540.11131351674604183No Hit
GTTCTGGATTCAGTAAAATTTAGTAGGAAAATTAAAAAAATTGATTCCAC606890.10904067562708675No Hit
GTCTTCAGGGTGTTTAGAAAACCAGCTACCTGCCTTTCTGGAAGAACTTT561170.10082610677660246No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)