FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006204950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006204950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36504700
Sequences flagged as poor quality0
Sequence length95
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC879780.24100458297150779No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA642220.17592803118502548No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA598390.16392135807170036No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA590320.16171068382975343No Hit
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTT561770.1538897730977107No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT482420.13215284607187566No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC426130.11673291384397078No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT397800.108972269324224No Hit
ACCCTACACTGAGCAGATGGGCAACTGTGGAGAGAAGGGTGAAAGGATCC365630.10015970546258426No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)