FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26815633
Sequences flagged as poor quality0
Sequence length8
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGGTGC850498931.716532665852043No Hit
GCGATGTG725523227.055978876202552No Hit
TTTCCACT606058922.600954450711644No Hit
AGATACAA463245817.27521405144529No Hit
GCGATGTA302830.11293039399815771No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)