FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19451747
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA451380.2320511365894282No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC392360.20170938887905543No Hit
CCACCTACTAAGAACGGCCATGCACCAC344230.1769661100362862No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA315310.16209855083967523No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA253310.1302248070571759No Hit
TGCCCTACAATGGATCCTCGTTAAAGGA230620.11856004501806444No Hit
CGTTCGTTATCGGAATTAACCAGACAAA196450.10099349945277408No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)