FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18325698
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA418010.22810045216285893No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC369460.2016076004308267No Hit
CCACCTACTAAGAACGGCCATGCACCAC318770.17394698963171826No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA295330.16115620807458467No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA223770.12210721796244814No Hit
TGCCCTACAATGGATCCTCGTTAAAGGA209320.11422211585064862No Hit
CGTTCGTTATCGGAATTAACCAGACAAA184960.10092930703103369No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)