FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17520465
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA401960.22942313460287728No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC350030.1997835103120836No Hit
CCACCTACTAAGAACGGCCATGCACCAC302830.17284358605779016No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA278490.15895126071140236No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA205520.11730282272759314No Hit
TGCCCTACAATGGATCCTCGTTAAAGGA192620.10994000444622903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)