FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18089055
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA411880.22769569775756668No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC364640.20158045845954917No Hit
CCACCTACTAAGAACGGCCATGCACCAC313320.17320971161843446No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA292730.16182713801246112No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA218980.12105662788907436No Hit
TGCCCTACAATGGATCCTCGTTAAAGGA201400.11133804391661145No Hit
CGTTCGTTATCGGAATTAACCAGACAAA182790.10105005485361175No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)