FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31300360
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA713810.2280516901403051No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC632890.2021989523443181No Hit
CCACCTACTAAGAACGGCCATGCACCAC555370.17743246403555743No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA498060.15912277047292747No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA387680.12385800035526748No Hit
TGCCCTACAATGGATCCTCGTTAAAGGA356110.11377185438122756No Hit
CGTTCGTTATCGGAATTAACCAGACAAA314180.10037584232258032No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)