FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31150709
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA709290.22769626206581686No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC631100.202595709779832No Hit
CCACCTACTAAGAACGGCCATGCACCAC551020.1768884297304437No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA496520.15939284078574262No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA380480.12214168223265802No Hit
TGCCCTACAATGGATCCTCGTTAAAGGA359570.11542915443754427No Hit
CGTTCGTTATCGGAATTAACCAGACAAA315680.10133958748739876No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)