FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205388

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205388
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16255048
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA322850.19861522402148551No Hit
CGTTCGTTATCGGAATTAACCAGACAAA272280.16750488832761368No Hit
CCTCTATATAAATGCGTAGGGGTTTTAG207580.1277018683672912No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)