FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205391

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205391
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16729494
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA333860.1995637166312382No Hit
CGTTCGTTATCGGAATTAACCAGACAAA284360.16997525448169562No Hit
CCTCTATATAAATGCGTAGGGGTTTTAG220120.13157600582540036No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)