FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205409

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205409
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39297022
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA719900.18319454334224106No Hit
CGTTCGTTATCGGAATTAACCAGACAAA694210.17665715229006412No Hit
CCACCTACTAAGAACGGCCATGCACCAC547400.13929808726981907No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)