FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2452698
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAAAT63326225.818996060664624No Hit
TCTATCCG62806725.607188492019805No Hit
AAATGTGC58423123.81993217265232No Hit
CTCGCGTA56962423.22438392333667No Hit
TCTATCCA28070.11444539849586048No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)