FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205435

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205435
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67031751
Sequences flagged as poor quality0
Sequence length8
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGCGC2237790333.38403467932682No Hit
GGCGAGTA1886489728.143225737904416No Hit
CAAATACG1253183318.69536870668946No Hit
ACTTCTAT1135765416.943692847886368No Hit
TCTTCTAT2708040.4039936238574463No Hit
CCTTCTAT2328670.34739805618385233No Hit
GCTTCTAT1068830.15945130241338915No Hit
CAAATACA705530.10525310609892916No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)