FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24092738
Sequences flagged as poor quality0
Sequence length91
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAA483200.20055835912049513No Hit
CTCTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCAC286970.1191105801258454No Hit
CTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTT270760.11238241166280064No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)