FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10457323
Sequences flagged as poor quality0
Sequence length91
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAACAC159550.15257250827960464No Hit
CTCCTACTTACAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTA135530.12960295861569926No Hit
CAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACC129130.12348284546628233No Hit
CACAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCAC126110.12059491707390123No Hit
CTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGG123430.1180321196925829No Hit
ACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAA111210.10634652864791497No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC105200.10059935989354062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)