FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140711824
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGGAAG3887480427.627247586528338No Hit
GTAATCTT3352865223.827885281339256No Hit
AGTTCGGC3312223823.539058096496568No Hit
CAGCATCA3280770323.31552677477907No Hit
TCCGGCAG2368180.16830000014781984No Hit
GTAATCTA1661500.11807820784129697No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)