FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140651633
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGGAAG3891268727.666004418164132No Hit
GTAATCTT3354220923.847720985934092No Hit
AGTTCGGC3305690623.50268197739304No Hit
CAGCATCA3277953323.305476303997125No Hit
TCCGGCAG2248950.159895050774135No Hit
GTAATCTA1669660.11870889547368425No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)