FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116620565
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACACGT3212566227.547167174160066No Hit
CCTGTGCG3030880625.989246407784083No Hit
TACTCTTC2778460323.82478853536681No Hit
ATGAGAAA2313248919.835685927263345No Hit
AGGAGAAA9721950.8336394185708156No Hit
CTGAGAAA2452190.21027080429596615No Hit
TCCTCTTC1746860.14979004775015453No Hit
TACTCTTA1596840.1369261073293548No Hit
CCTGTGCA1442880.12372431911987392No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)