FastQCFastQC Report
Tue 28 Jun 2022
EGAF00006205893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118253814
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGTCTTCCAGTTTTCCACTTCAAACT6527090.5519559817326484No Hit
TCCTAGCTTCCTTCACCAAATCGCACTG1419450.12003418342177107No Hit
TCCACTTCAAACTTCTATCTTCTCCAAA1215080.1027518655761919No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)